By galeep
EHR/physiological-signal ML: PyHealth pipelines and NeuroKit2 biosignal processing.
Comprehensive biosignal processing toolkit for analyzing physiological data including ECG, EEG, EDA, RSP, PPG, EMG, and EOG signals. Use this skill when processing cardiovascular signals, brain activity, electrodermal responses, respiratory patterns, muscle activity, or eye movements. Applicable for heart rate variability analysis, event-related potentials, complexity measures, autonomic nervous system assessment, psychophysiology research, and multi-modal physiological signal integration.
Build clinical/healthcare deep-learning pipelines with PyHealth — loading EHR/signal/imaging datasets (MIMIC-III/IV, eICU, OMOP, SleepEDF, ChestXray14, EHRShot), defining tasks (mortality, readmission, length-of-stay, drug recommendation, sleep staging, ICD coding, EEG events), instantiating models (Transformer, RETAIN, GAMENet, SafeDrug, MICRON, StageNet, AdaCare, CNN/RNN/MLP), training with the PyHealth Trainer, computing clinical metrics, and using medical code utilities (ICD/ATC/NDC/RxNorm lookup and cross-mapping). Use this skill whenever the user mentions PyHealth, MIMIC, eICU, OMOP, EHR modeling, clinical prediction, drug recommendation, sleep staging, medical code mapping, ICD/ATC codes, or any healthcare ML pipeline that fits the dataset → task → model → trainer → metrics pattern, even if "PyHealth" isn't named explicitly.
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A curated Claude Code plugin marketplace. Currently hosts K-Dense AI's scientific tooling split into focused, individually-installable plugins so you only load what you need.
# Add the marketplace (one time)
claude plugin marketplace add galeep/plugin-place
# List what's available
claude plugin search @plugin-place
# Install whichever pieces you want
claude plugin install sci-bioinformatics-genomics@plugin-place
claude plugin install sci-machine-learning@plugin-place
claude plugin install kdense-document-skills@plugin-place
19 plugins, 135 skills, all sourced from K-Dense AI and licensed MIT. Two upstream repos vendor in, pinned to release tags:
v2.38.0 — 135 scientific skills, split here into 17 domain plugins
plus the general-purpose kdense-document-skills pluginv2.13.0 — full writer plugin with a /scientific-writer-init command| Plugin | Skills | What it covers |
|---|---|---|
sci-bioinformatics-genomics | 20 | Sequence analysis, scRNA-seq, gene regulatory networks, variants, phylogenetics, biomedical DBs |
sci-cheminformatics-drug-discovery | 9 | Cheminformatics, molecular ML, docking, medicinal chemistry |
sci-proteomics-mass-spec | 3 | LC-MS/MS, spectral matching, glycoengineering |
sci-clinical-research | 4 | CDS, clinical/case/trial reports, treatment plans, ISO 13485 |
sci-healthcare-ai | 2 | PyHealth, NeuroKit2 biosignal processing |
sci-medical-imaging | 4 | DICOM, WSI, computational pathology, NCI Imaging Data Commons |
sci-machine-learning | 16 | scikit-learn, Lightning, transformers, RL, time series, GNNs, Bayesian, SHAP, GPU/compute helpers |
sci-materials-chemistry | 2 | pymatgen, COBRApy |
sci-physics-astronomy | 6 | astropy, sympy, qutip, qiskit, cirq, pennylane |
sci-engineering-simulation | 4 | SimPy, pymoo, CFD, molecular dynamics |
sci-data-analysis-viz | 14 | Stats, EDA, networks, survival, plotting, big-data dataframes, MATLAB, US fiscal data |
sci-geospatial | 2 | GIS, remote sensing, earth-observation ML |
sci-lab-automation | 11 | Benchling, DNAnexus, LatchBio, OMERO, Opentrons, protocols.io, PyLabRobot, flow cytometry, Neuropixels |
sci-scientific-communication | 22 | Lit review, peer review, writing, citations, posters, slides, schematics, infographics, academic web search |
sci-multi-omics | 3 | DepMap, PrimeKG, scvi-tools |
sci-protein-engineering | 2 | ESM, Adaptyv Bio Foundry |
sci-research-methodology | 7 | Hypothesis generation, grant writing, brainstorming, critical thinking, scenario analysis |
kdense-document-skills | 4 | General-purpose .docx, .pdf, .pptx, .xlsx tools (useful with any plugin) |
claude-scientific-writer | 23 | K-Dense's full writer plugin including the /scientific-writer-init command |
The claude-scientific-writer plugin and the sci-* plugins share most of
their skills (K-Dense maintains the same skill code in both upstreams).
Specifically:
sci-* plugins
(mostly sci-scientific-communication, plus sci-clinical-research and
sci-research-methodology)/scientific-writer-init slash
command (which the bare skills lack)Pick one approach:
sci-* plugins: get exactly the domain slices
you want, granular enable/disableInstalling both will give you duplicate skill names, which is unsupported and will confuse Claude Code's skill router.
plugins.yaml is the source of truth. Everything else is generated:
git submodule update --init --recursive
bash scripts/build.sh
This regenerates plugins/* and .claude-plugin/marketplace.json from
the YAML and the pinned upstream submodules. The build is idempotent —
edits inside plugins/* will be overwritten.
The built plugin kind copies a chosen subset of skills from an upstream
submodule. The vendored plugin kind copies an entire upstream plugin
intact (skills, commands, agents, hooks) and generates a plugin.json
from its upstream marketplace metadata. A local kind is reserved for
plugins authored directly in this repo.
To add a new plugin, edit plugins.yaml and rerun scripts/build.sh.
Sequence analysis, single-cell RNA-seq, gene regulatory networks, variant data, phylogenetics, and biomedical database lookup.
Cheminformatics, molecular ML featurization, docking, and medicinal chemistry workflows.
LC-MS/MS processing, spectral matching, peptide ID, and glycoengineering.
DICOM, whole-slide imaging, computational pathology, and NCI Imaging Data Commons.
Clinical decision support, clinical/case/trial reports, treatment plans, and ISO 13485 QMS docs.
npx claudepluginhub galeep/plugin-place --plugin sci-healthcare-aiUI/UX design intelligence. 67 styles, 161 palettes, 57 font pairings, 25 charts, 15 stacks (React, Next.js, Vue, Svelte, Astro, SwiftUI, React Native, Flutter, Tailwind, shadcn/ui, Nuxt, Jetpack Compose). Actions: plan, build, create, design, implement, review, fix, improve, optimize, enhance, refactor, check UI/UX code. Projects: website, landing page, dashboard, admin panel, e-commerce, SaaS, portfolio, blog, mobile app. Elements: button, modal, navbar, sidebar, card, table, form, chart. Styles: glassmorphism, claymorphism, minimalism, brutalism, neumorphism, bento grid, dark mode, responsive, skeuomorphism, flat design. Topics: color palette, accessibility, animation, layout, typography, font pairing, spacing, hover, shadow, gradient.
Comprehensive skill pack with 66 specialized skills for full-stack developers: 12 language experts (Python, TypeScript, Go, Rust, C++, Swift, Kotlin, C#, PHP, Java, SQL, JavaScript), 10 backend frameworks, 6 frontend/mobile, plus infrastructure, DevOps, security, and testing. Features progressive disclosure architecture for 50% faster loading.
This skill should be used when users need to generate ideas, explore creative solutions, or systematically brainstorm approaches to problems. Use when users request help with ideation, content planning, product features, marketing campaigns, strategic planning, creative writing, or any task requiring structured idea generation. The skill provides 30+ research-validated prompt patterns across 14 categories with exact templates, success metrics, and domain-specific applications.
Develop, test, build, and deploy Godot 4.x games with Claude Code. Includes GdUnit4 testing, web/desktop exports, CI/CD pipelines, and deployment to Vercel/GitHub Pages/itch.io.
Upstash Context7 MCP server for up-to-date documentation lookup. Pull version-specific documentation and code examples directly from source repositories into your LLM context.
A growing collection of Claude-compatible academic workflow bundles. Covers scientific figures, manuscript writing and polishing, reviewer assessment, citation retrieval, data availability, paper reading, literature search, response letters, paper-to-PPTX conversion, and evidence-grounded Chinese invention patent drafting. Rules are organized as reusable skill folders with explicit workflows and quality checks.