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From ontoindex
Runs OntoIndex CLI commands to analyze/index a repo, check status, clean the index, generate a wiki, or list indexed repos.
How this skill is triggered — by the user, by Claude, or both
Slash command
/ontoindex:ontoindex-cliThe summary Claude sees in its skill listing — used to decide when to auto-load this skill
All commands work via `npx` — no global install required.
All commands work via npx — no global install required.
npx ontoindex analyze
Run from the project root. This parses all source files, builds the knowledge graph, writes it to .ontoindex/, and generates CLAUDE.md / AGENTS.md context files.
| Flag | Effect |
|---|---|
--force | Force full re-index even if up to date |
--embeddings | Enable embedding generation for semantic search (off by default) |
When to run: First time in a project, after major code changes, or when ontoindex://repo/{name}/context reports the index is stale.
npx ontoindex status
Shows whether the current repo has a OntoIndex index, when it was last updated, and symbol/relationship counts. Use this to check if re-indexing is needed.
npx ontoindex clean
Deletes the .ontoindex/ directory and unregisters the repo from the global registry. Use before re-indexing if the index is corrupt or after removing OntoIndex from a project.
| Flag | Effect |
|---|---|
--force | Skip confirmation prompt |
--all | Clean all indexed repos, not just the current one |
npx ontoindex wiki
Generates repository documentation from the knowledge graph using an LLM. Requires an API key (saved to ~/.ontoindex/config.json on first use).
| Flag | Effect |
|---|---|
--force | Force full regeneration |
--model <model> | LLM model (default: minimax/minimax-m2.5) |
--base-url <url> | LLM API base URL |
--api-key <key> | LLM API key |
--concurrency <n> | Parallel LLM calls (default: 3) |
--gist | Publish wiki as a public GitHub Gist |
npx ontoindex list
Lists all repositories registered in ~/.ontoindex/registry.json. The MCP list_repos tool provides the same information.
ontoindex://repo/{name}/context to verify the index loadedexploring, debugging, impact-analysis, refactoring) for your task--embeddings (it's off by default) or set OPENAI_API_KEY for faster API-based embeddingnpx claudepluginhub ontograph/ontoindex --plugin ontoindexRuns GitNexus CLI to index git repos into knowledge graphs, check status, clean indexes, generate LLM wikis, and list repos. Use before exploring codebases with other skills.
Quick reference for OntoIndex MCP tools, resources, and knowledge graph schema. Guides users through code understanding, debugging, impact analysis, and refactoring workflows.
Re-indexes the current codebase with Codescope's index_codebase tool, fetches graph stats, and reports counts for files, functions, classes, imports, and relations. Use after code changes to refresh the knowledge graph.