By ruvnet
Perform brute-force L2 k-nearest neighbors searches on pinned genomic DNA collections to find similar sequences, plus call variants, translate codons to proteins, score sequences with FNV-1a, and trace lineages via slash commands and local MCP server.
rvDNA T0 — variant calls for a region in a pinned collection. Returns whatever variants the registered RVDNA file's VariantTensor section holds for the region. Empty array if no variant data registered (genuine answer, not a stub). Witness-anchored.
rvDNA T0 — real brute-force L2 kNN over a pinned genomic collection. Returns a witnessed bundle pointer plus the matching segments. Deterministic; ties broken by lower id (matches the ADR-157 kernel-conformance contract).
rvDNA — internal capability tier. Reveals lineage / provenance metadata for a registered rvDNA collection (e.g. assembly version, source URI, build epoch). Gated by --capabilities internal.
rvDNA T0 — deterministic FNV-1a score in [0.0, 1.0] over (witness, region). Region-sensitive, witness-sensitive, reproducible across operators. Production scorer model wires here in v0.2.
rvDNA T0 — real codon-table DNA → protein translation. Standard genetic code (64 codons → 20 amino acids + 3 stop codons). Case-insensitive, skips Ns + whitespace, stops at first stop codon. Witness-anchored.
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