worktree-data-sync

AgentContract

Skills and agents designed for academic research workflows, econ-flavored. Made by Claude, for Claude. For Codex, see below for installation instructions.

Available Skills

Skills	Description
worktree-data-sync	multi-agent work in parallel in different worktrees with isolated data
work-journal	Teach agents how to document and report the results
draft-reviewer	Comprehensive review of a paper draft. Even better, it can fixes things
review-doc-commit	Make sure we commit the right stuff
zotero-connector	Read papers from Zotero library
pdf2markdown-converter	Convert PDFs to markdown via Mistral OCR

Prerequisites

• Claude Code CLI
• uv — Python scripts use PEP 723 inline metadata for auto-installing dependencies
• API keys per plugin (see individual plugin docs)

Installation

From GitHub

# Add marketplace
/plugin marketplace add FuZhiyu/AgentContract

# Install individual plugins
/plugin install zotero-connector@FuZhiyu-AgentContract
/plugin install pdf2markdown-converter@FuZhiyu-AgentContract
/plugin install work-journal@FuZhiyu-AgentContract

Direct Installation (local development)

/plugin install ./plugins/zotero-connector

Updating Plugins

# Update marketplace listing
/plugin marketplace update FuZhiyu-AgentContract

Configuration

Create .claude/agent-contract.yaml (per-project) or ~/.config/agent-contract/config.yaml (global):

paper-reader:
  mistral_api_key: "sk-..."
  zotero_api_key: "..."
  zotero_library_type: "user"
  zotero_library_id: "12345"

Plugin Details

zotero-connector

• Search Zotero by title/author/topic
• Download PDFs from local storage or web API
• Integrates with pdf2markdown-converter
• Requires: Zotero API key, library ID

pdf2markdown-converter

• Convert PDFs to markdown using Mistral OCR
• Extract images to separate folder
• Great for scanned documents
• Requires: Mistral API key

work-journal

• work-journal skill: formal, fact-checked journal entries with citations and report-checker verification
• report-in-markdown skill: pure IO tool for saving markdown reports (no content rules)
• Agents: code-reviewer, report-checker, results-summarizer

worktree-data-sync

• Sync non-git files between existing worktrees
• Seed missing managed files from one worktree to another
• Diff and apply overwrite/rename actions for managed data

draft-reviewer

• Multi-agent paper review system
• Specialized agents: mathematical, writing, consistency, proofreading, citations
• Supports quick, standard, and deep (parallel) thoroughness levels
• Integrates with pdf2markdown-converter for PDF input

review-doc-commit

• Two-agent code review: implementation correctness + integration/consistency
• Ensure CLAUDE.md coverage for all directories with AGENTS.md symlinks
• Hard gate: no commit until review is clean
• Group changes into topical commits

Codex

Tell Codex:

Fetch and follow instructions from https://raw.githubusercontent.com/FuZhiyu/AgentContract/main/CODEX_INSTALL.md

Detailed docs: CODEX_INSTALL.md

License

MIT