{"name":"bsphinney-ucdavis-proteomics-core","owner":{"name":"ClaudePluginHub"},"plugins":[{"name":"bsphinney-ucdavis-proteomics-core-pipeline-skill-ucdavis-proteomics-core-pipeline","source":{"source":"github","repo":"bsphinney/de-limp"},"description":"UC Davis Proteomics Core pipeline — end-to-end proteomics search + differential expression from raw mass-spec data. Detects DIA/DDA + instrument, auto-installs the toolchain, runs DIA-NN (DIA) or Sage (DDA) with data-derived parameters, then limpa/limma DE — with a written analysis report, full reproducibility bundle, and tidy session packaging.","version":"1.0.0","strict":true,"keywords":["proteomics","mass-spectrometry","DIA","DDA","DIA-NN","Sage","differential-expression","limma","limpa","bioinformatics"],"category":"deployment"}]}